miRBase entry: mdo-mir-551a

Stem-loop mdo-mir-551a


Accession
MI0012520
Description
Monodelphis domestica mdo-mir-551a precursor miRNA
Gene family
MIPF0000360; mir-551


Sequence

13 reads, 1 reads per million, 1 experiments
ugacccuggaaauccagaagggguggagccuguuggacaguuucuagGCGACCCAUUCUUGGUUUCAAggguugccauggaaa
.((((((.((((((.((((.((((...(((((..(((....)))))))).)))).)))).)))))).))))))..........

Structure
---------u      g      c    g    gga     uu   c 
          gacccu gaaauc agaa gggu   gccug  gga a
          |||||| |||||| |||| ||||   |||||  |||  
          uugggA CUUUGG UCUU CCCA   CGgau  cuu g
aaagguaccg      A      U    A    --G     --   u 


Annotation confidence Not enough data
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Genome context
NW_001583655.1: 280288-280370 [-]

Database links

Mature mdo-miR-551a

Accession MIMAT0012763
Description Monodelphis domestica mdo-miR-551a mature miRNA
Sequence 48 - GCGACCCAUUCUUGGUUUCAA - 68
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39