miRBase entry: mmu-mir-599

Stem-loop mmu-mir-599


Accession
MI0012529
Symbol
MGI: Mir599
Description
Mus musculus mmu-mir-599 precursor miRNA
Gene family
MIPF0000502; mir-599

Literature search
2 open access papers mention mmu-mir-599
(2 sentences)

Sequence

67 reads, 14 reads per million, 8 experiments
ugcuguccacaguguauuugauaagaugacauaggagaggaacuucuuucaccuUUGUGUCAGUUUAUCAAACccauaccuggaugac
....(((((..((((.(((((((((.((((((((((((((....))))))....)))))))).)))))))))...)))).)))))...

Structure
ugcu     ca    --a         a        ----      a 
    gucca  gugu   uuugauaag ugacauag    gagagg a
    |||||  ||||   ||||||||| ||||||||    ||||||  
    uaggu  caua   AAACUAUUU ACUGUGUU    cuuucu c
-cag     -c    ccC         G        ucca      u 


Annotation confidence Not enough data
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Genome context
chr15: 35660831-35660918 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-599
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-599

Accession MIMAT0012772
Description Mus musculus mmu-miR-599 mature miRNA
Sequence 55 - UUGUGUCAGUUUAUCAAAC - 73
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39