miRBase entry: mml-mir-516b

Stem-loop mml-mir-516b


Accession
MI0012535
Description
Macaca mulatta mml-mir-516b precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

288 reads, 43 reads per million, 5 experiments
ucucaggcugugaccAUCUGGAGGUAAGAAGCACUUUcuguuuugugaaagaaaagaaagugcuuccuuucagaggguuacucuuugaga
(((((((..((((((.((((((((...((((((((((((.((((.....)))).)))))))))))))))))))).))))))..)))))))

Structure
       cu      A        UAA            g    g 
ucucagg  gugacc UCUGGAGG   GAAGCACUUUcu uuuu u
|||||||  |||||| ||||||||   |||||||||||| |||| g
agaguuu  cauugg agacuuuc   cuucgugaaaga aaga a
       cu      g        ---            a    a 


Annotation confidence Not enough data
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Genome context
chr19: 49089836-49089925 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from mml-mir-516b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-516b

Accession MIMAT0012778
Description Macaca mulatta mml-miR-516b mature miRNA
Sequence 16 - AUCUGGAGGUAAGAAGCACUUU - 37
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39