miRBase entry: mml-mir-1234

Stem-loop mml-mir-1234


Accession
MI0012547
Description
Macaca mulatta mml-mir-1234 precursor miRNA
Gene family
MIPF0000593; mir-1234


Sequence

6 reads, 0 reads per million, 4 experiments
ugggguggggcagggauggcuugggccugcccagUCGGCCUGACCACCCACCCCACaggcacccagga
((((((((((..(((.(((.(((((((.((...)).))))))))))))).)))))).....))))...

Structure
---    -----      ca   a   c       u  c 
   uggg     gugggg  ggg ugg uugggcc gc  
   ||||     ||||||  ||| ||| ||||||| || c
   accc     CACCCC  CCC ACC AGUCCGG Ug  
agg    acgga      -A   -   -       C  a 


Annotation confidence Not enough data
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Genome context
chr8: 143644566-143644633 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-1234
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-1234

Accession MIMAT0012790
Description Macaca mulatta mml-miR-1234 mature miRNA
Sequence 35 - UCGGCCUGACCACCCACCCCAC - 56
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39