miRBase entry: ptr-mir-892b

Stem-loop ptr-mir-892b


Accession
MI0012561
Description
Pan troglodytes ptr-mir-892b precursor miRNA
Gene family
MIPF0000386; mir-743


Sequence

gcagugcccUAUUCAGAAAGGUGCCAGUCACuuagauuacaugucacuguuuccuuucugaguggaguaaggc
((..(((.(((((((((((((...((((.((...........)).))))...))))))))))))).)))..))

Structure
  ag   c             UGC    C  uuag 
gc  ugc cUAUUCAGAAAGG   CAGU AC    a
||  ||| |||||||||||||   |||| ||    u
cg  aug ggugagucuuucc   guca ug    u
  ga   a             uuu    c  uaca 


Annotation confidence Not enough data
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Genome context
chrX: 145719532-145719604 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from ptr-mir-892b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-892b

Accession MIMAT0012799
Description Pan troglodytes ptr-miR-892b mature miRNA
Sequence 10 - UAUUCAGAAAGGUGCCAGUCAC - 31
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39