miRBase entry: rno-mir-504

Stem-loop rno-mir-504


Accession
MI0012592
Description
Rattus norvegicus rno-mir-504 precursor miRNA
Gene family
MIPF0000437; mir-504

Literature search
5 open access papers mention rno-mir-504
(52 sentences)

Sequence

44647 reads, 67 reads per million, 424 experiments
cuguugggAGACCCUGGUCUGCACUCUGUCuggaaacuuacagaagggagagcagggcaggguuucccauacagagg
((((((((((((((((.(((((.((((.((((........))))..)))).))))).)))))))))))).))))...

Structure
---    -            G     A    -G    gaa 
   cugu ugggAGACCCUG UCUGC CUCU  UCug   a
   |||| |||||||||||| ||||| ||||  ||||    
   gaca acccuuugggac ggacg gagg  agac   c
gga    u            g     a    ga    auu 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature rno-miR-504

Accession MIMAT0012830
Description Rattus norvegicus rno-miR-504 mature miRNA
Sequence 9 - AGACCCUGGUCUGCACUCUGUC - 30
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39