miRBase entry: rno-mir-568

Stem-loop rno-mir-568


Accession
MI0012594
Description
Rattus norvegicus rno-mir-568 precursor miRNA
Gene family
MIPF0000408; mir-568

Literature search
3 open access papers mention rno-mir-568
(4 sentences)

Sequence

guauacacuauauuAUGUAUAAAUGUAUACACACuucuauaugugcccacauauauacaguguaucuauuauacugguauagguguuugugugcgc
(((((((((((((((.((((((..(.((((((.....((((((((....))))))))..)))))))..)))))))))))))).....)))))))..

Structure
--       -----        U      AU U      ACuuc        c 
  guauaca     cuauauuA GUAUAA  G AUACAC     uauaugug c
  |||||||     |||||||| ||||||  | ||||||     ||||||||  
  cgugugu     gauauggu cauauu  c uaugug     auauauac c
cg       uugug        -      au -      ---ac        a 


Annotation confidence Not enough data
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Genome context
chr11: 61996027-61996122 [-]

Database links

Mature rno-miR-568

Accession MIMAT0012832
Description Rattus norvegicus rno-miR-568 mature miRNA
Sequence 15 - AUGUAUAAAUGUAUACACAC - 34
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39