miRBase entry: rno-mir-935

Stem-loop rno-mir-935


Accession
MI0012607
Description
Rattus norvegicus rno-mir-935 precursor miRNA
Gene family
MIPF0000606; mir-935


Sequence

8013 reads, 39 reads per million, 121 experiments
ggcggcggcgcgggcggcaguggcgggagcggccccucggccauccuccgucugcCCAGUUACCGCUUCCGCUACCGCcgccgcucccgcu
(((((.((.((((.((((.(((((((((((((...((.(((............))).))...))))))))))))).)))))))))))))))

Structure
     c  c    g    a             ccc  c   caucc 
ggcgg gg gcgg cggc guggcgggagcgg   cu ggc     u
||||| || |||| |||| |||||||||||||   || |||      
ucgcc cu cgcc gcCG CAUCGCCUUCGCC   GA Ccg     c
     -  -    -    C             AUU  C   ucugc 


Annotation confidence Not enough data
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Genome context
chr1: 64330549-64330639 [-]

Database links

Mature rno-miR-935

Accession MIMAT0012845
Description Rattus norvegicus rno-miR-935 mature miRNA
Sequence 56 - CCAGUUACCGCUUCCGCUACCGC - 78
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39