miRBase entry: eca-mir-147b

Stem-loop eca-mir-147b


Accession
MI0012664
Description
Equus caballus eca-mir-147b precursor miRNA
Gene family
MIPF0000105; mir-147


Sequence

uaggaauguuaaggagaccauucugcacaaacuggaguauggauaucaGUGUGCCGAAAUGCUUCUGCUAcauuuuuagg
(((((((((..(((((.(..(((.((((..(((((.((....)).))))))))).)))..))))))...)))))))))..

Structure
--         -ua     a ca   u    aa     a  a 
  uaggaaugu   aggag c  uuc gcac  acugg gu u
  |||||||||   ||||| |  ||| ||||  ||||| ||  
  auuuuuacA   UCUUC G  AAG CGUG  UGacu ua g
gg         UCG     - UA   C    --     a  g 


Annotation confidence Not enough data
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Genome context
chr2: 104313827-104313906 [+]

Database links

Mature eca-miR-147b

Accession MIMAT0012908
Description Equus caballus eca-miR-147b mature miRNA
Sequence 49 - GUGUGCCGAAAUGCUUCUGCUA - 70
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131