Stem-loop eca-mir-302a

Accession

MI0012667

Description

Equus caballus eca-mir-302a precursor miRNA

Gene family

MIPF0000071; mir-302

Literature search

3 open access papers mention eca-mir-302a
(3 sentences)

Sequence

ccaccacuuaaacguggauguacuugcuuugaaacuauaaaagUAAGUGCUUCCAUGUUUUAGUGAug
....((((.(((((((((.(((((((((((.........))))))))))).))))))))).))))...

Structure

ccac    u         u           gaa 
    cacu aaacgugga guacuugcuuu   a
    |||| ||||||||| |||||||||||   c
    GUGA UUUGUACCU CGUGAAUgaaa   u
-guA    U         U           aua 

Annotation confidence Not enough data

Genome context

chr2: 113629373-113629440 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from eca-mir-302a

Mature eca-miR-302a

• Accession: MIMAT0012911
• Description: Equus caballus eca-miR-302a mature miRNA
• Sequence: 44 - UAAGUGCUUCCAUGUUUUAGUGA - 66
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131