Stem-loop eca-mir-429

Accession

MI0012675

Description

Equus caballus eca-mir-429 precursor miRNA

Gene family

MIPF0000019; mir-8

Literature search

2 open access papers mention eca-mir-429
(2 sentences)

Sequence

4 reads, 1 reads per million, 1 experiments

gggcgucuuaccagacacgguuagaucugcguccuucugucUAAUACUGUCUGGUAAUGCCGuccau
(((((.(((((((((((..(((((((............)))))))..)))))))))).).)))))..

Structure

--     u -          cg       cugcg 
  gggcg c uuaccagaca  guuagau     u
  ||||| | ||||||||||  |||||||      
  ccuGC G AAUGGUCUGU  UAAUcug     c
ua     C U          CA       ucuuc 

Annotation confidence Not enough data

Genome context

chr2: 48453025-48453091 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from eca-mir-429

Mature eca-miR-429

• Accession: MIMAT0012919
• Description: Equus caballus eca-miR-429 mature miRNA
• Sequence: 42 - UAAUACUGUCUGGUAAUGCCG - 62
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131