Stem-loop eca-mir-328

Accession

MI0012684

Description

Equus caballus eca-mir-328 precursor miRNA

Gene family

MIPF0000203; mir-328

Literature search

1 open access papers mention eca-mir-328
(3 sentences)

Sequence

61 reads, 9 reads per million, 1 experiments

ggagcgggggggcaggaggggcucagggagaaagugugugcagcccCUGGCCCUCUCUGCCCUUCCGUccc
(((.((((((((((((.(((((.(((((................)))))))))).))))))))))))))).

Structure

-   g            a     u     agaaagu 
 gga cgggggggcagg ggggc caggg       g
 ||| |||||||||||| ||||| |||||        
 ccU GCCUUCCCGUCU UCCCG GUCcc       u
c   -            C     -     cgacgug 

Annotation confidence Not enough data

Genome context

chr3: 17669430-17669500 [-]

Mature eca-miR-328

• Accession: MIMAT0012929
• Description: Equus caballus eca-miR-328 mature miRNA
• Sequence: 47 - CUGGCCCUCUCUGCCCUUCCGU - 68
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131