miRBase entry: eca-mir-129a

Stem-loop eca-mir-129a


Accession
MI0012687
Description
Equus caballus eca-mir-129a precursor miRNA
Gene family
MIPF0000073; mir-129


Sequence

38 reads, 6 reads per million, 1 experiments
uggauCUUUUUGCGGUCUGGGCUUGCuguuccucucaacaguagucaggAAGCCCUUACCCCAAAAAGUAUcu
.(((((((((((.(((..((((((.(((..(..((....))..).))).))))))..))).))))))).))))

Structure
u    -       C   CU      G   uu cu  c 
 ggau CUUUUUG GGU  GGGCUU Cug  c  cu a
 |||| ||||||| |||  |||||| |||  |  ||  
 ucUA GAAAAAC CCA  CCCGAA gac  g  ga a
-    U       C   UU      g   -u au  c 


Annotation confidence Not enough data
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Genome context
chr4: 83387805-83387877 [+]

Database links

Mature eca-miR-129a-5p

Accession MIMAT0012932
Description Equus caballus eca-miR-129a-5p mature miRNA
Sequence 6 - CUUUUUGCGGUCUGGGCUUGC - 26
Evidence not_experimental

Mature eca-miR-129a-3p

Accession MIMAT0012933
Description Equus caballus eca-miR-129a-3p mature miRNA
Sequence 50 - AAGCCCUUACCCCAAAAAGUAU - 71
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131