miRBase entry: eca-mir-153-1

Stem-loop eca-mir-153-1


Accession
MI0012690
Description
Equus caballus eca-mir-153-1 precursor miRNA
Gene family
MIPF0000050; mir-153


Sequence

9 reads, 1 reads per million, 1 experiments
gugucauuuuugugauguugcagcuaguaauaugagcccagUUGCAUAGUCACAAAAGUGAUCauug
((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).)))..

Structure
--   -             gu       -a  aa 
  gug ucauuuuugugau  ugcagcu  gu  u
  ||| |||||||||||||  |||||||  ||  a
  uaC AGUGAAAACACUG  ACGUUga  cg  u
gu   U             AU       cc  ag 


Annotation confidence Not enough data
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Genome context
chr4: 107797720-107797786 [-]

Database links

Mature eca-miR-153

Accession MIMAT0012936
Description Equus caballus eca-miR-153 mature miRNA
Sequence 42 - UUGCAUAGUCACAAAAGUGAUC - 63
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131