miRBase entry: eca-mir-135b

Stem-loop eca-mir-135b


Accession
MI0012704
Description
Equus caballus eca-mir-135b precursor miRNA
Gene family
MIPF0000028; mir-135

Literature search
3 open access papers mention eca-mir-135b
(21 sentences)

Sequence

136 reads, 21 reads per million, 1 experiments
gcucugcuguggccUAUGGCUUUUCAUUCCUAUGUGAuugcuguucuaaacucauguagggcuaaaagccaugggcuacagugaggggc
((((((((((((((((((((((((...((((((((((..............))))))))))..)))))))))))))))))))..)))))

Structure
     --                   CAU          uugcug 
gcucu  gcuguggccUAUGGCUUUU   UCCUAUGUGA      u
|||||  |||||||||||||||||||   ||||||||||       
cgggg  ugacaucggguaccgaaaa   gggauguacu      u
     ag                   -uc          caaauc 


Annotation confidence Not enough data
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Genome context
chr5: 1903337-1903425 [-]

Database links

Mature eca-miR-135b

Accession MIMAT0012952
Description Equus caballus eca-miR-135b mature miRNA
Sequence 15 - UAUGGCUUUUCAUUCCUAUGUGA - 37
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131