Stem-loop eca-mir-190b

Accession

MI0012710

Description

Equus caballus eca-mir-190b precursor miRNA

Gene family

MIPF0000076; mir-190

Sequence

71 reads, 11 reads per million, 1 experiments

ugcuucugugUGAUAUGUUUGAUAUUGGGUUguuuaauuagaaaccaacuaaaugucaaacauauucuuacagcaguggg
.(((.(((((.(((((((((((((((.((((((((......))).))))).)))))))))))))))..))))).)))...

Structure

--u   u     -U               G     -   aa 
   gcu cugug  GAUAUGUUUGAUAUU GGUUg uuu  u
   ||| |||||  ||||||||||||||| ||||| |||   
   uga gacau  uuauacaaacuguaa ucaac aaa  u
ggg   c     uc               a     c   ga 

Annotation confidence Not enough data

Genome context

chr5: 43502619-43502698 [+]

Mature eca-miR-190b

• Accession: MIMAT0012958
• Description: Equus caballus eca-miR-190b mature miRNA
• Sequence: 11 - UGAUAUGUUUGAUAUUGGGUU - 31
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131