Stem-loop eca-mir-92b

Accession

MI0012719

Description

Equus caballus eca-mir-92b precursor miRNA

Gene family

MIPF0000013; mir-25

Literature search

1 open access papers mention eca-mir-92b
(2 sentences)

Sequence

1488 reads, 225 reads per million, 1 experiments

gggcgggagggacgggacgcggugcaguguuguucuuucccccgccaaUAUUGCACUCGUCCCGGCCUCCggccc
((((.(((((..(((((((.((((((((((((.............))))))))))))))))))).))))).))))

Structure

    g     ga       c            uucuu 
gggc ggagg  cgggacg ggugcaguguug     u
|||| |||||  ||||||| ||||||||||||     c
cccg CCUCC  GCCCUGC UCACGUUAUaac     c
    g     -G       -            cgccc 

Annotation confidence Not enough data

Genome context

chr5: 42707135-42707209 [-]

Mature eca-miR-92b

• Accession: MIMAT0012966
• Description: Equus caballus eca-miR-92b mature miRNA
• Sequence: 49 - UAUUGCACUCGUCCCGGCCUCC - 70
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131