miRBase entry: eca-mir-153-2

Stem-loop eca-mir-153-2


Accession
MI0012726
Description
Equus caballus eca-mir-153-2 precursor miRNA
Gene family
MIPF0000050; mir-153


Sequence

9 reads, 1 reads per million, 1 experiments
ccagugucauuuuugugaucugcagcuaguauucucgcuccagUUGCAUAGUCACAAAAGUGAUCauug
.((((((((((((((((((.((((((((((......)))..)))))))..))))))))))))).)))))

Structure
c     -             -c       --   au 
 cagug ucauuuuugugau  ugcagcu  agu  u
 ||||| |||||||||||||  |||||||  |||   
 guuaC AGUGAAAACACUG  ACGUUga  ucg  c
-     U             AU       cc   cu 


Annotation confidence Not enough data
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Genome context
chr6: 8829305-8829373 [-]

Database links

Mature eca-miR-153

Accession MIMAT0012936
Description Equus caballus eca-miR-153 mature miRNA
Sequence 44 - UUGCAUAGUCACAAAAGUGAUC - 65
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131