Stem-loop eca-mir-1302c-5

Accession

MI0012734

Description

Equus caballus eca-mir-1302c-5 precursor miRNA

Gene family

MIPF0000456; mir-1302

Sequence

caguuaaauuugaauuucugggaaacaaugaauaauuuuuuaguguaaguauaucccaugcaauauUUGCGACAUACUUAUACUAAAaauaaugcuuguuuguuugaaauucagauguaacu
.(((((.(((((((((((.((.((((((.(......((((((((((((((((.((....((((...)))))).)))))))))))))))).....))))))).)).))))))))))).)))))

Structure

c     a           u  g      u aauaau                a  ccau    u 
 aguua auuugaauuuc gg aaacaa g      uuuuuaguguaaguau uc    gcaa  
 ||||| ||||||||||| || |||||| |      |||||||||||||||| ||    |||| a
 ucaau uagacuuaaag uu uuuguu c      aaAAAUCAUAUUCAUA AG    CGUU  
-     g           u  g      - -guaau                C  ----    u 

Annotation confidence Not enough data

Genome context

chr7: 87986152-87986273 [-]

Mature eca-miR-1302c

• Accession: MIMAT0012982
• Description: Equus caballus eca-miR-1302c mature miRNA
• Sequence: 67 - UUGCGACAUACUUAUACUAAA - 87
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131