miRBase entry: eca-mir-1905c

Stem-loop eca-mir-1905c


Accession
MI0012736
Description
Equus caballus eca-mir-1905c precursor miRNA
Gene family
MIPF0000753; mir-1905

Literature search
1 open access papers mention eca-mir-1905c
(1 sentences)

Sequence

cgugugcguccgcugcuggaugcgcuugaugguggcgcccuugggcccCACCACCAGCCCCACCACGCGGUAGggcacacgca
.(((((.((((((((((((.((.(((.(.((((((.(((....))).))))))).)))..))))).))))).)))).))))).

Structure
c     c    -     -   a  -c   u a      c   c 
 gugug gucc gcugc ugg ug  gcu g uggugg gcc u
 ||||| |||| ||||| ||| ||  ||| | |||||| |||  
 cgcac cggG UGGCG ACC AC  CGA C ACCACc cgg u
a     a    A     C   -  CC   C -      c   g 


Annotation confidence Not enough data
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Genome context
chr7: 525371-525453 [+]

Database links

Mature eca-miR-1905c

Accession MIMAT0012985
Description Equus caballus eca-miR-1905c mature miRNA
Sequence 49 - CACCACCAGCCCCACCACGCGGUAG - 73
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131