miRBase entry: eca-mir-708

Stem-loop eca-mir-708


Accession
MI0012745
Description
Equus caballus eca-mir-708 precursor miRNA
Gene family
MIPF0000397; mir-708

Literature search
1 open access papers mention eca-mir-708
(1 sentences)

Sequence

90 reads, 14 reads per million, 1 experiments
gguaacugcccucAAGGAGCUUACAAUCUAGCUGGGgguaaaugacuugcacaugaacgcaacuagacugugagcuucuagagggcaggggcc
(((..((((((((.(((((((((((.(((((.((.(..((..((.....))..))..).)).))))).))))))))))).))))))))..)))

Structure
   aa        A           A     C  G gg  aa  a 
ggu  cugcccuc AGGAGCUUACA UCUAG UG G  ua  ug c
|||  |||||||| ||||||||||| ||||| || |  ||  || u
ccg  gacgggag ucuucgagugu agauc ac c  gu  ac u
   gg        a           c     a  g aa  ac  g 


Annotation confidence High
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Genome context
chr7: 65231355-65231447 [+]

Database links

Mature eca-miR-708

Accession MIMAT0012993
Description Equus caballus eca-miR-708 mature miRNA
Sequence 14 - AAGGAGCUUACAAUCUAGCUGGG - 36
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131