Stem-loop eca-mir-151

Accession

MI0012756

Description

Equus caballus eca-mir-151 precursor miRNA

Gene family

MIPF0000057; mir-28

Sequence

47143 reads, 7136 reads per million, 1 experiments

ccugcccUCGAGGAGCUCACAGUCUAGUaugucucauccccuacuagacugaagcuccuugaggacagg
((((.((((((((((((..((((((((((.(........).)))))))))).)))))))))))).))))

Structure

    c            CA          u ucu 
ccug ccUCGAGGAGCU  CAGUCUAGUa g   c
|||| ||||||||||||  |||||||||| |    
ggac ggaguuccucga  gucagaucau c   a
    a            -a          c ccu 

Annotation confidence High

Genome context

chr9: 79874699-79874767 [-]

Mature eca-miR-151-5p

• Accession: MIMAT0013004
• Description: Equus caballus eca-miR-151-5p mature miRNA
• Sequence: 8 - UCGAGGAGCUCACAGUCUAGU - 28
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131