Stem-loop eca-mir-150

Accession

MI0012762

Description

Equus caballus eca-mir-150 precursor miRNA

Gene family

MIPF0000197; mir-150

Literature search

1 open access papers mention eca-mir-150
(3 sentences)

Sequence

441 reads, 67 reads per million, 1 experiments

cccugUCUCCCAACCCUUGUACCAGUGcugugccucggucccugguacaggcauggggggcaggg
((((((((((((..(((.(((((((.((((.....))))..))))))))))..))))))))))))

Structure

            AC   U       -U    u 
cccugUCUCCCA  CCU GUACCAG  Gcug g
||||||||||||  ||| |||||||  |||| c
gggacggggggu  gga caugguc  uggc c
            ac   -       cc    u 

Annotation confidence Not enough data

Genome context

chr10: 19329710-19329774 [-]

Mature eca-miR-150

• Accession: MIMAT0013011
• Description: Equus caballus eca-miR-150 mature miRNA
• Sequence: 6 - UCUCCCAACCCUUGUACCAGUG - 27
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131