miRBase entry: eca-mir-769b

Stem-loop eca-mir-769b


Accession
MI0012766
Description
Equus caballus eca-mir-769b precursor miRNA
Gene family
MIPF0000727; mir-769


Sequence

gcccGGAAACCUCUGGGUUCUGAGCUgugacguggcuucugagcugggaucucgggggucuugguucaugguuugggucucuggguucugggc
((((((((.(((..(((.((((((((((((((.((((((((((.......)))))))))).))..)))))))))))).))).)))))))))))

Structure
        A   CU   U            --  u          cu 
gcccGGAA CCU  GGG UCUGAGCUguga  cg ggcuucugag  g
|||||||| |||  ||| ||||||||||||  || ||||||||||  g
cgggucuu ggg  cuc ggguuugguacu  gu cugggggcuc  g
        -   -u   u            ug  u          ua 


Annotation confidence Not enough data
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Genome context
chr10: 16445550-16445642 [+]

Database links

Mature eca-miR-769b

Accession MIMAT0013017
Description Equus caballus eca-miR-769b mature miRNA
Sequence 5 - GGAAACCUCUGGGUUCUGAGCU - 26
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131