Stem-loop eca-mir-10a

Accession

MI0012768

Description

Equus caballus eca-mir-10a precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

10696 reads, 1619 reads per million, 1 experiments

aagaugucugucuucuguauaUACCCUGUAGAUCCGAAUUUGUGuaaggaauuuuguggucacaaauucguaucuaggggaauauguaguugacauaaacacuccgcuca
.((.(((.((((..((((((((.((((.(((((.((((((((((................)))))))))).))))))))).))))))))..))))...))))).......

Structure

------a  a   --c    uu        A    G     C          uaaggaa 
       ag ugu   uguc  cuguauaU CCCU UAGAU CGAAUUUGUG       u
       || |||   ||||  |||||||| |||| ||||| ||||||||||        
       uc aca   acag  gauguaua gggg aucua gcuuaaacac       u
acucgcc  -   aau    uu        a    -     u          ugguguu 

Annotation confidence Not enough data

Genome context

chr11: 24629492-24629601 [-]

Mature eca-miR-10a

• Accession: MIMAT0013019
• Description: Equus caballus eca-miR-10a mature miRNA
• Sequence: 22 - UACCCUGUAGAUCCGAAUUUGUG - 44
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131