miRBase entry: eca-mir-192

Stem-loop eca-mir-192


Accession
MI0012792
Description
Equus caballus eca-mir-192 precursor miRNA
Gene family
MIPF0000063; mir-192


Sequence

611 reads, 92 reads per million, 1 experiments
CUGACCUAUGAAUUGACAGCCagugcucuugucucccucuggcugccaauuccauagguca
.((((((((((((((.(((((((...............))))))).))))).)))))))))

Structure
C         -     A       ugcucu 
 UGACCUAUG AAUUG CAGCCag      u
 ||||||||| ||||| |||||||      g
 acuggauac uuaac gucgguc      u
-         c     c       ucccuc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr12: 25044238-25044298 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from eca-mir-192
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-192

Accession MIMAT0013049
Description Equus caballus eca-miR-192 mature miRNA
Sequence 1 - CUGACCUAUGAAUUGACAGCC - 21
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131