Stem-loop eca-mir-106b

Accession

MI0012797

Description

Equus caballus eca-mir-106b precursor miRNA

Gene family

MIPF0000001; mir-17

Literature search

1 open access papers mention eca-mir-106b
(1 sentences)

Sequence

203 reads, 31 reads per million, 1 experiments

UAAAGUGCUGACAGUGCAGAUagugguccucuccaugcuaccgcacuguggguacuugc
..(((((((.(((((((.(...((((......))))....).))))))).)))))))..

Structure

UA       G       A -AUa    uc 
  AAGUGCU ACAGUGC G    gugg  c
  ||||||| ||||||| |    ||||   
  uucaugg ugucacg c    uacc  u
cg       g       c aucg    uc 

Annotation confidence Not enough data

Genome context

chr13: 8034691-8034749 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from eca-mir-106b

Mature eca-miR-106b

• Accession: MIMAT0013054
• Description: Equus caballus eca-miR-106b mature miRNA
• Sequence: 1 - UAAAGUGCUGACAGUGCAGAU - 21
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131