Stem-loop eca-mir-365-2

Accession

MI0012802

Description

Equus caballus eca-mir-365-2 precursor miRNA

Gene family

MIPF0000061; mir-365

Sequence

54 reads, 8 reads per million, 1 experiments

accgcagggaaaaugagggacuuuugggggcagauguguuuccauuccacuaucaUAAUGCCCCUAAAAAUCCUUAUugcucuugca
...((((((..((((((((..(((((((((((((((((.........))).)))....))))))))))).))))))))..)))))).

Structure

acc      aa        ac           ----   -   uuu 
   gcaggg  aaugaggg  uuuugggggca    gau gug   c
   ||||||  ||||||||  |||||||||||    ||| |||   c
   cguucu  uUAUUCCU  AAAAUCCCCGU    cua cac   a
--a      cg        -A           AAUa   u   cuu 

Annotation confidence Not enough data

Genome context

chr13: 30682630-30682716 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-365-2

Mature eca-miR-365

• Accession: MIMAT0013038
• Description: Equus caballus eca-miR-365 mature miRNA
• Sequence: 56 - UAAUGCCCCUAAAAAUCCUUAU - 77
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131