miRBase entry: eca-mir-217

Stem-loop eca-mir-217


Accession
MI0012819
Description
Equus caballus eca-mir-217 precursor miRNA
Gene family
MIPF0000077; mir-217


Sequence

UACUGCAUCAGGAACUGAUUGGAuaagaaucagucaccaucaguuccuaaugcauug
...(((((.((((((((((.((((........))).).)))))))))).)))))...

Structure
UAC     C          U -   aag 
   UGCAU AGGAACUGAU G GAu   a
   ||||| |||||||||| | |||    
   acgua uccuugacua c cug   a
guu     a          c a   acu 


Annotation confidence Not enough data
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Genome context
chr15: 44376604-44376660 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from eca-mir-217
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-217

Accession MIMAT0013074
Description Equus caballus eca-miR-217 mature miRNA
Sequence 1 - UACUGCAUCAGGAACUGAUUGGA - 23
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131