Stem-loop eca-let-7g

Accession

MI0012820

Description

Equus caballus eca-let-7g precursor miRNA

Gene family

MIPF0000002; let-7

Literature search

6 open access papers mention eca-let-7g
(13 sentences)

Sequence

12647 reads, 1914 reads per million, 1 experiments

ccaggcUGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauaacuguacaggccacugccuugccagg
((.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))))).))

Structure

  a   U        A            ugagg    -a  a    a 
cc ggc GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
|| ||| |||||||| ||||||||||||     ||||  || ||||  
gg ccg uuccguca cggacaugucaa     uaga  ac augg c
  a   -        c            -----    gg  -    c 

Annotation confidence Not enough data

Genome context

chr16: 35442180-35442267 [+]

Mature eca-let-7g

• Accession: MIMAT0013075
• Description: Equus caballus eca-let-7g mature miRNA
• Sequence: 7 - UGAGGUAGUAGUUUGUACAGUU - 28
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131