Stem-loop eca-mir-1289

Accession

MI0012822

Description

Equus caballus eca-mir-1289 precursor miRNA

Literature search

1 open access papers mention eca-mir-1289
(1 sentences)

Sequence

uuaaaaugugcauuucuuggacuuaccccagaucuaaucuguugaacuaaaaucucagaggcUGGAGUCCAGGAAUCUGCAUUUUuaa
.(((((.(((((.((((((((((....((((.((...((((..((.......)).))))))))))))))))))))..)))))))))).

Structure

u     u     -u          uacc    a  uaa    uu  ac 
 uaaaa gugca  uucuuggacu    ccag uc   ucug  ga  u
 ||||| |||||  ||||||||||    |||| ||   ||||  ||  a
 auUUU UACGU  AAGGACCUGA    GGUc gg   agac  cu  a
a     -     CU          ----    -  ---    -u  aa 

Annotation confidence Not enough data

Genome context

chr16: 27474897-27474984 [+]

Mature eca-miR-1289

• Accession: MIMAT0013077
• Description: Equus caballus eca-miR-1289 mature miRNA
• Sequence: 63 - UGGAGUCCAGGAAUCUGCAUUUU - 85
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131