Stem-loop eca-mir-551b

Accession

MI0012841

Description

Equus caballus eca-mir-551b precursor miRNA

Gene family

MIPF0000360; mir-551

Sequence

augaaaucaagcgugggugagaccuggugcagaacgggaagGCGACCCAUACUUGGUUUCAG
.((((((((((.((((((....((((........))))......)))))).)))))))))).

Structure

a          c      --gaga    gug 
 ugaaaucaag gugggu      ccug   c
 |||||||||| ||||||      ||||    
 ACUUUGGUUC UACCCA      gggc   a
G          A      GCGgaa    aag 

Annotation confidence Not enough data

Genome context

chr19: 9177992-9178053 [+]

Mature eca-miR-551b

• Accession: MIMAT0013094
• Description: Equus caballus eca-miR-551b mature miRNA
• Sequence: 42 - GCGACCCAUACUUGGUUUCAG - 62
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131