Stem-loop eca-mir-1898

Accession

MI0012850

Description

Equus caballus eca-mir-1898 precursor miRNA

Gene family

MIPF0000786; mir-1898

Sequence

AGGUCAAGGUUCACAGGGGAUCaagaaauauuauucuuguauaaucuguuuacuuugaccu
((((((((((..(((((..((((((((......)))))).))..)))))..))))))))))

Structure

          UC     GG  -      au 
AGGUCAAGGU  ACAGG  AU Caagaa  a
||||||||||  |||||  || ||||||   
uccaguuuca  ugucu  ua guucuu  u
          uu     aa  u      au 

Annotation confidence Not enough data

Genome context

chr21: 31945364-31945424 [+]

Mature eca-miR-1898

• Accession: MIMAT0013101
• Description: Equus caballus eca-miR-1898 mature miRNA
• Sequence: 1 - AGGUCAAGGUUCACAGGGGAUC - 22
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131