Stem-loop eca-mir-296

Accession

MI0012857

Description

Equus caballus eca-mir-296 precursor miRNA

Gene family

MIPF0000159; mir-296

Sequence

26 reads, 4 reads per million, 1 experiments

aggacucuuccggagggccccccccaauccuguuguguuugauucaGAGGGUUGGGUGGAGGCUUUCCugaaggcucu
.(((.(((((.((((((((.(((((((((((.(((.........)))))))))))).)).)))))))).))))).)))

Structure

a   c     c        c  -         g   ugu 
 gga ucuuc ggagggcc cc cccaauccu uug   u
 ||| ||||| |||||||| || ||||||||| |||   u
 ucu ggaag CCUUUCGG GG GGGUUGGGA Gac   g
-   c     u        A  U         -   uua 

Annotation confidence Not enough data

Genome context

chr22: 45210449-45210526 [-]

Mature eca-miR-296

• Accession: MIMAT0013107
• Description: Equus caballus eca-miR-296 mature miRNA
• Sequence: 47 - GAGGGUUGGGUGGAGGCUUUCC - 68
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131