Stem-loop eca-mir-491

Accession

MI0012867

Description

Equus caballus eca-mir-491 precursor miRNA

Gene family

MIPF0000319; mir-491

Sequence

3 reads, 0 reads per million, 1 experiments

uugacuuagcuggguAGUGGGGAACCCUUCCAUGAGGaguagaacacucCUUAUGCAAGAUUCCCUUCUACcugacuggguugg
..(((((((.(((((((.((((((..(((.((((((((((.....)))))))))).))).)))))).))))))).)))))))..

Structure

uu       c       U      CC   C          a 
  gacuuag uggguAG GGGGAA  CUU CAUGAGGagu g
  ||||||| ||||||| ||||||  ||| |||||||||| a
  uuggguc gucCAUC UCCCUU  GAA GUAUUCcuca a
gg       a       U      -A   C          c 

Annotation confidence Not enough data

Genome context

chr23: 39789354-39789437 [+]

Mature eca-miR-491-5p

• Accession: MIMAT0013116
• Description: Equus caballus eca-miR-491-5p mature miRNA
• Sequence: 16 - AGUGGGGAACCCUUCCAUGAGG - 37
• Evidence: not_experimental

Mature eca-miR-491-3p

• Accession: MIMAT0013117
• Description: Equus caballus eca-miR-491-3p mature miRNA
• Sequence: 50 - CUUAUGCAAGAUUCCCUUCUAC - 71
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131