miRBase entry: eca-mir-7-3

Stem-loop eca-mir-7-3


Accession
MI0012869
Description
Equus caballus eca-mir-7-3 precursor miRNA
Gene family
MIPF0000022; mir-7

Literature search
1 open access papers mention eca-mir-7-3
(4 sentences)

Sequence

40 reads, 6 reads per million, 1 experiments
uggucuaguucugugUGGAAGACUAGUGAUUUUGUUGUuuguagauaacuaaaucgacaacaaaucacagucugccauauggcacagg
....((.((.((((((((.(((((.(((((((.((((((..(((....)))....)))))))))))))))))).)))))))).)))).

Structure
uggu  a  u        A     A       U      --ug   a 
    cu gu cugugUGG AGACU GUGAUUU GUUGUu    uag u
    || || |||||||| ||||| ||||||| ||||||    |||  
    ga ca gguauacc ucuga cacuaaa caacag    auc a
---g  -  c        g     -       -      cuaa   a 


Annotation confidence Not enough data
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Genome context
chr23: 6798793-6798880 [-]

Database links

Mature eca-miR-7

Accession MIMAT0012905
Description Equus caballus eca-miR-7 mature miRNA
Sequence 16 - UGGAAGACUAGUGAUUUUGUUGU - 38
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131