miRBase entry: eca-mir-369

Stem-loop eca-mir-369


Accession
MI0012886
Description
Equus caballus eca-mir-369 precursor miRNA
Gene family
MIPF0000018; mir-154


Sequence

467 reads, 71 reads per million, 1 experiments
uugaagggAGAUCGACCGUGUCAUAUUCGCuuuauugacuucgAAUAAUACAUGGUUGAUCUUUucucgg
.(((.((((((((((((((((..((((((............))))))..)))))))))))))))).))).

Structure
u   a                CA      Cuuua 
 uga gggAGAUCGACCGUGU  UAUUCG     u
 ||| ||||||||||||||||  ||||||      
 gcu uUUUCUAGUUGGUACA  AUAAgc     u
g   c                UA      uucag 


Annotation confidence High
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Genome context
chr24: 42935933-42936002 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from eca-mir-369
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-369-5p

Accession MIMAT0013140
Description Equus caballus eca-miR-369-5p mature miRNA
Sequence 9 - AGAUCGACCGUGUCAUAUUCGC - 30
Evidence not_experimental

Mature eca-miR-369-3p

Accession MIMAT0013141
Description Equus caballus eca-miR-369-3p mature miRNA
Sequence 44 - AAUAAUACAUGGUUGAUCUUU - 64
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131