Stem-loop eca-mir-432

Accession

MI0012901

Description

Equus caballus eca-mir-432 precursor miRNA

Gene family

MIPF0000211; mir-432

Sequence

981 reads, 148 reads per million, 1 experiments

ugcgugacuccuccaggUCUUGGAGUAGGUCAUUGGGUGGauccuuuauuucccuaugugggccacuggauggcuccuccaugucuugg
............(((((.(.(((((..(((((((.(((((.(((..(((......))).)))))))).))))))).))))).).)))))

Structure

ugcgugacuccu     U U     UA       G     a   uu   uu 
            ccagg C UGGAG  GGUCAUU GGUGG ucc  uau  c
            ||||| | |||||  ||||||| ||||| |||  |||   
            gguuc g accuc  ucgguag ucacc ggg  gua  c
------------     u u     -c       g     -   -u   uc 

Annotation confidence Not enough data

Genome context

chr24: 42748485-42748573 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from eca-mir-432

Mature eca-miR-432

• Accession: MIMAT0013157
• Description: Equus caballus eca-miR-432 mature miRNA
• Sequence: 18 - UCUUGGAGUAGGUCAUUGGGUGG - 40
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131