Stem-loop eca-mir-155

Accession

MI0012927

Description

Equus caballus eca-mir-155 precursor miRNA

Gene family

MIPF0000157; mir-155

Literature search

7 open access papers mention eca-mir-155
(72 sentences)

Sequence

1759 reads, 266 reads per million, 1 experiments

cugUUAAUGCUAAUCGUGAUAGGGGUuuuuaccucggacugacuccuacauguuagcauuaacag
(((((((((((((.((((.((((((((....(....)...)))))))))))))))))))))))))

Structure

             U    A        uuua c 
cugUUAAUGCUAA CGUG UAGGGGUu    c u
||||||||||||| |||| ||||||||    |  
gacaauuacgauu guac auccucag    g c
             -    -        -uca g 

Annotation confidence Not enough data

Genome context

chr26: 23253374-23253438 [+]

Mature eca-miR-155

• Accession: MIMAT0013182
• Description: Equus caballus eca-miR-155 mature miRNA
• Sequence: 4 - UUAAUGCUAAUCGUGAUAGGGGU - 26
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131