Stem-loop eca-mir-33a

Accession

MI0012935

Description

Equus caballus eca-mir-33a precursor miRNA

Gene family

MIPF0000070; mir-33

Sequence

9 reads, 1 reads per million, 1 experiments

cugugGUGCAUUGUAGUUGCAUUGCAuguucuggcgguacccaugcaauguuuccacagugcaucacag
((((((((((((((.(..((((((((((....((.....))))))))))))..).))))))))))))))

Structure

              A UU          uucu  c 
cugugGUGCAUUGU G  GCAUUGCAug    gg g
|||||||||||||| |  ||||||||||    || g
gacacuacgugaca c  uguaacguac    cc u
              c uu          ----  a 

Annotation confidence Not enough data

Genome context

chr28: 38272567-38272635 [+]

Mature eca-miR-33a

• Accession: MIMAT0013189
• Description: Equus caballus eca-miR-33a mature miRNA
• Sequence: 6 - GUGCAUUGUAGUUGCAUUGCA - 26
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131