miRBase entry: eca-mir-664

Stem-loop eca-mir-664


Accession
MI0012940
Description
Equus caballus eca-mir-664 precursor miRNA
Gene family
MIPF0000300; mir-664


Sequence

70 reads, 11 reads per million, 1 experiments
gaacauugaaacaggcuaggaaaacugauuggauagaaaauauuacucUAUUCAUUUAUCUCCUAGCCUACAaa
............(((((((((....(((.((((((((.........)))))))).)))..))))))))).....

Structure
gaacauugaaac         aaac   u        aaa 
            aggcuagga    uga uggauaga   u
            |||||||||    ||| ||||||||   a
            UCCGAUCCU    AUU ACUUAUcu   u
-------aaACA         --CU   U        cau 


Annotation confidence Not enough data
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Genome context
chr30: 10420840-10420913 [-]

Database links

Mature eca-miR-664

Accession MIMAT0013192
Description Equus caballus eca-miR-664 mature miRNA
Sequence 49 - UAUUCAUUUAUCUCCUAGCCUACA - 72
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131