Stem-loop eca-mir-448

Accession

MI0012964

Description

Equus caballus eca-mir-448 precursor miRNA

Gene family

MIPF0000149; mir-448

Sequence

2 reads, 0 reads per million, 1 experiments

ggcggggagguugaacauccugcauagugcugccaggaaauccccauuuuauacuaagagggggcuggcuggUUGCAUAUGUAGGAUGUCCCAUcuccccgcccgcuuc
(((((((((((.(.((((((((((((.(((.(((((....(((((.(((((...))))))))))....))))).))))))))))))))).).)))))))))))......

Structure

------           u a            g   u     gaaa     a     u 
      ggcggggaggu g acauccugcaua ugc gccag    ucccc uuuua  
      ||||||||||| | |||||||||||| ||| |||||    ||||| ||||| a
      ccgccccucUA C UGUAGGAUGUAU ACG Ugguc    ggggg agaau  
cuucgc           C C            -   U     gguc     -     c 

Annotation confidence Not enough data

Genome context

chrX: 90871684-90871792 [+]

Mature eca-miR-448

• Accession: MIMAT0013218
• Description: Equus caballus eca-miR-448 mature miRNA
• Sequence: 73 - UUGCAUAUGUAGGAUGUCCCAU - 94
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131