Stem-loop eca-mir-504

Accession

MI0012973

Description

Equus caballus eca-mir-504 precursor miRNA

Gene family

MIPF0000437; mir-504

Sequence

13 reads, 2 reads per million, 1 experiments

gcugcuguugggAGACCCUGGUCUGCACUCUAUCuguaugcuuacugaagggagcgcagggcaggguuucccauacagagggc
(((.((((((((((((((((.(((((.((((.((.(((....))).))..)))).))))).)))))))))))).))))..)))

Structure

   -g    -            G     A    -A  u   u 
gcu  cugu ugggAGACCCUG UCUGC CUCU  UC gua g
|||  |||| |||||||||||| ||||| ||||  || |||  
cgg  gaca acccuuugggac ggacg gagg  ag cau c
   ga    u            g     c    ga  u   u 

Annotation confidence Not enough data

Genome context

chrX: 110329553-110329635 [-]

Mature eca-miR-504

• Accession: MIMAT0013228
• Description: Equus caballus eca-miR-504 mature miRNA
• Sequence: 13 - AGACCCUGGUCUGCACUCUAUC - 34
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131