miRBase entry: eca-mir-672

Stem-loop eca-mir-672


Accession
MI0012984
Description
Equus caballus eca-mir-672 precursor miRNA
Gene family
MIPF0000391; mir-672


Sequence

gauggcgaucuagcccuuuaguuuUGAGGUUGGUGUACUGUGUGUGAguauauauauuuaucacacauaggcaauaucuuugaaagugagggugcacguc
(((....)))..((((((((.((((((((....(((.((((((((((..(.......)..)))))))))))))....)))))))).)))))).)).....

Structure
gauggcgaucua  -      g        UUGG   A          gu ua 
            gc ccuuua uuuUGAGG    UGU CUGUGUGUGA  a  u
            || |||||| ||||||||    ||| ||||||||||  |  a
            cg gggagu aaaguuuc    acg gauacacacu  u  u
-------cugca  u      g        uaua   -          au ua 


Annotation confidence Not enough data
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Genome context
chrX: 55914662-55914761 [-]

Database links

Mature eca-miR-672

Accession MIMAT0013242
Description Equus caballus eca-miR-672 mature miRNA
Sequence 25 - UGAGGUUGGUGUACUGUGUGUGA - 47
Evidence not_experimental

References

  1. PubMed ID: 19406225
    In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
    "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
    "Genomics (2009) 94:125-131