Stem-loop bmo-mir-306b

Accession

MI0012989

Description

Bombyx mori bmo-mir-306b precursor miRNA

Gene family

MIPF0000313; mir-306

Literature search

2 open access papers mention bmo-mir-306b
(23 sentences)

Sequence

271843 reads, 7 reads per million, 3 experiments

gagcccgcgcUGAGGCACGAGGCGGCUCUGAgaccggcaccacucagagucaccuaguaccugaggcggccgcccg
(.((((((.((.(((.((.(((.(((((((((..........))))))))).))).)).))).))))))..)).).

Structure

- a  --    g  G   C  G   C         accg 
 g gc  ccgc cU AGG AC AGG GGCUCUGAg    g
 | ||  |||| || ||| || ||| |||||||||     
 c cg  ggcg ga ucc ug ucc cugagacuc    c
g c  cc    -  g   a  a   a         acca 

Annotation confidence Not enough data

Genome context

NW_004581774.1: 30994-31069 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from bmo-mir-306b

Mature bmo-miR-306b

• Accession: MIMAT0013782
• Description: Bombyx mori bmo-miR-306b mature miRNA
• Sequence: 11 - UGAGGCACGAGGCGGCUCUGA - 31
• Evidence: not_experimental

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148