Stem-loop sequence bmo-mir-2854

Accession

MI0012995 (change log)

Description

Bombyx mori miR-2854 stem-loop

Literature search

1 open access papers mention bmo-mir-2854
(1 sentences)

Stem-loop

   -     -    ----uu  uuca      c    c    uuu 
5'  aagcc cuuu      cu    aaacug agga ggcc   a
    ||||| ||||      ||    |||||| |||| ||||   u
3'  uuugg gaag      ga    uuugac uuuu ccgg   a
   c     u    uaaauc  cgca      c    -    ugc 

Deep sequencing

328 reads, 0 reads per million, 3 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (ASM15162v1; GCA_000151625.1): NW_004581840.1: 40728-40807 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0012995

Mature sequence bmo-miR-2854

• Accession: MIMAT0013789
• Sequence: 11 - ucuuucaaaacugcaggacgg - 31
• Deep sequencing: 325 reads, 3 experiments
• Evidence: not experimental
• Database links:
  • RNAcentral:URS00004EA96C_7091

References

1. PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).