Stem-loop osa-MIR2878

Accession

MI0013043

Description

Oryza sativa osa-MIR2878 precursor miRNA

Literature search

3 open access papers mention osa-MIR2878
(18 sentences)

Sequence

109 reads, 87 reads per million, 2 experiments

auaauguuucuuuaguucuuUACAUGUAUAAAAUUCUGAGGAUGuuauauauaugacauccuCAGGAUUUUAUACAUGUAAAGAAUuaaacauacauuaua
(((((((...((((((((((((((((((((((((((((((((((((((....))))))))))))))))))))))))))))))))))))))...))))))).

Structure

-       uuc                                      a 
 auaaugu   uuuaguucuuUACAUGUAUAAAAUUCUGAGGAUGuuau u
 |||||||   ||||||||||||||||||||||||||||||||||||||  
 uauuaca   aaauUAAGAAAUGUACAUAUUUUAGGACuccuacagua a
a       uac                                      u 

Annotation confidence Not enough data

Genome context

Chr8: 26181373-26181473 [+]

Mature osa-miR2878-5p

• Accession: MIMAT0013828
• Description: Oryza sativa osa-miR2878-5p mature miRNA
• Sequence: 21 - UACAUGUAUAAAAUUCUGAGGAUG - 44
• Evidence: experimental ; Illumina [1]

Mature osa-miR2878-3p

• Accession: MIMAT0013829
• Description: Oryza sativa osa-miR2878-3p mature miRNA
• Sequence: 63 - CAGGAUUUUAUACAUGUAAAGAAU - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19903869
   Rice MicroRNA effector complexes and targets
   "Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y"
   "Plant Cell (2009) 21:3421-3435