miRBase entry: ssc-mir-324

Stem-loop ssc-mir-324


Accession
MI0013167
Description
Sus scrofa ssc-mir-324 precursor miRNA
Gene family
MIPF0000165; mir-324

Literature search
3 open access papers mention ssc-mir-324
(8 sentences)

Sequence

3 reads, 4 reads per million, 1 experiments
cuaugccucccCGCAUCCCCUAGGGCAUUGGUGUgaagcuggagacccacugccccaggugcugcuggggguuguagucu
(((((.(((((.(((.(.(((.(((((.(((.((..........))))).))))).))).).))).))))).)))))...

Structure
---     c     C   U C   A     U   U  gaag 
   cuaug cuccc GCA C CCU GGGCA UGG GU    c
   ||||| ||||| ||| | ||| ||||| ||| ||     
   gaugu ggggg cgu g gga cccgu acc ca    u
ucu     u     u   c u   c     c   -  gagg 


Annotation confidence Not enough data
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Genome context
chr3: 139855128-139855207 [-]

Database links

Mature ssc-miR-324

Accession MIMAT0013957
Description Sus scrofa ssc-miR-324 mature miRNA
Sequence 12 - CGCAUCCCCUAGGGCAUUGGUGU - 34
Evidence experimental
Illumina [1-3]

References

  1. PubMed ID: 19917043
    MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing
    "Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, Bendixen C, Thomsen B"
    "Anim Genet (2010) 41:159-168

  2. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328

  3. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100