Stem-loop zma-MIR164f

Accession

MI0013194

Description

Zea mays zma-MIR164f precursor miRNA

Gene family

MIPF0000045; MIR164

Literature search

29 open access papers mention zma-MIR164f
(206 sentences)

Sequence

1522 reads, 2839 reads per million, 3 experiments

cUGGAGAAGCAGGGCACGUGCUcgccgacaagucgaagccuuagggcagcuuggccuguggcugcacgcguacguggucgucgcagCACGUGCGCUCCUUCUCCAACa
.((((((((.((.(((((((((((.((((.......((((.((((.((...)).)))).)))).((((....)))))))).)).))))))))).)).))))))))...

Structure

--c        C  G         -  c    ------aagucga    u    g  g 
   UGGAGAAG AG GCACGUGCU cg cgac             agcc uagg ca  
   |||||||| || ||||||||| || ||||             |||| |||| || c
   ACCUCUUC UC CGUGCACga gc gcug             ucgg gucc gu  
aCA        C  G         c  u    gugcaugcgcacg    u    g  u 

Annotation confidence Not enough data

Genome context

chr4: 179535508-179535615 [+]

Mature zma-miR164f-5p

• Accession: MIMAT0013983
• Description: Zea mays zma-miR164f-5p mature miRNA
• Sequence: 2 - UGGAGAAGCAGGGCACGUGCU - 22
• Evidence: experimental ; Illumina [1]

Mature zma-miR164f-3p

• Accession: MIMAT0015318
• Description: Zea mays zma-miR164f-3p mature miRNA
• Sequence: 87 - CACGUGCGCUCCUUCUCCAAC - 107
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19936050
   A genome-wide characterization of microRNA genes in maize
   Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
   PLoS Genet (2009) 5:e1000716