miRBase entry: zma-MIR169l

Stem-loop zma-MIR169l


Accession
MI0013199
Description
Zea mays zma-MIR169l precursor miRNA

Literature search
32 open access papers mention zma-MIR169l
(230 sentences)

Sequence

gUAGCCAGGGAUGAUUUGCCUGugguuccugucguugccaugccaaugccuguacuguucgaucuacgGGCAAAUCAUCCCUGCUACCg
(((((.(((((((((((((((((((.....((((..((..(((........)))..)).))))))))))))))))))))))))))))..

Structure
--     C                   uuccu    uu  ca   caa 
  gUAGC AGGGAUGAUUUGCCUGugg     gucg  gc  ugc   u
  ||||| |||||||||||||||||||     ||||  ||  |||    
  CAUCG UCCCUACUAAACGGgcauc     uagc  ug  aug   g
gC     -                   -----    -u  uc   ucc 


Annotation confidence Not enough data
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Genome context
chr1: 303772025-303772113 [+]

Database links

Mature zma-miR169l-5p

Accession MIMAT0013988
Description Zea mays zma-miR169l-5p mature miRNA
Sequence 2 - UAGCCAGGGAUGAUUUGCCUG - 22
Evidence experimental
Illumina [1]

Mature zma-miR169l-3p

Accession MIMAT0015323
Description Zea mays zma-miR169l-3p mature miRNA
Sequence 69 - GGCAAAUCAUCCCUGCUACC - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19936050
    A genome-wide characterization of microRNA genes in maize
    Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
    PLoS Genet (2009) 5:e1000716